miRBase entry: atr-MIR8586

Stem-loop atr-MIR8586


Accession
MI0027473
Description
Amborella trichopoda atr-MIR8586 precursor miRNA


Sequence

761 reads, 6515 reads per million, 4 experiments
ugugcauaaggaccgauggcuuacuuuuuacucuguuguugugagaacaaaaugggaaucccaaccucucaucaacaaucggauuucacuuuUUUUCUCUUAACAACAGAGGAaaauguaugcuuuugaacaacacgaucgggauccucacguaca
(((((...((((((((((((.(((.(((..(((((((((((.(((((.((((..(((((((...................)))))))..)))).))))).)))))))))))..))).))).))).............)))))..))))...)))))

Structure
     aua    --     -------------   u   u   ua           u     c    ug       caaccucu 
ugugc   agga  ccgau             ggc uac uuu  cucuguuguug gagaa aaaa  ggaaucc        c
|||||   ||||  |||||             ||| ||| |||  ||||||||||| ||||| ||||  |||||||        a
acaug   uccu  ggcua             ucg aug aaa  GAGACAACAAU CUCUU Uuuu  cuuuagg        u
     cac    ag     gcacaacaaguuu   u   u   AG           U     U    ca       cuaacaac 


Annotation confidence High
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Genome context
scaffold00048: 2976684-2976839 [-]

Database links

Mature atr-miR8586

Accession MIMAT0033872
Description Amborella trichopoda atr-miR8586 mature miRNA
Sequence 93 - UUUUCUCUUAACAACAGAGGA - 113
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089