Accession
MI0027490
Description
Amborella trichopoda
atr-MIR8601 precursor miRNA
Sequence
212
reads,
108
reads per million, 4 experiments
uguuuaugaagaaauuuugaacucagggaacguuugggaugcgugaaaauacuuuugugaaaauauuuuuacaugaaagaacucucccaUGCGAUUAGGUGUUGGAGUUUuuucacaccaauuggcagauaauugcugugaaagaacucucacaccuaaucgcaugggggaggucuuucaugugaauacgaaaguauuuuuacauguaccaaacgugcacucauguacucuacauuucugugcauguca
.(((((...........)))))..((...((((((((.(((.(((((((((((((((((........(((((((((((((.(((((((((((((((((((((.((((((((((((((.((((((.....)))))).)))))))))))))).))))))))))))))))))))).)))))))))))))))))))))))))))))).))).))))))))...))(((((((...........)))))))...
.(((((...........)))))..((...((((((((.(((.(((((((((((((((((........(((((((((((((.(((((((((((((((((((((.((((((((((((((.((((((.....)))))).)))))))))))))).))))))))))))))))))))).)))))))))))))))))))))))))))))).))).))))))))...))(((((((...........)))))))...
Structure
----uguuuaugaagaaauuuugaacuc gga g c aaaauauu a U c g
ag acguuugg aug gugaaaauacuuuugug uuuacaugaaaga cucucccaUGCGAUUAGGUGU GGAGUUUuuucaca caauug c
|| |||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| a
uc ugcaaacc ugu cauuuuuaugaaagcau aaguguacuuucu gaggggguacgcuaauccaca ucucaagaaagugu guuaau g
acuguacgugucuuuacaucucauguac acg a a -------- g c c a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
scaffold00103: 2041972-2042220 [+]
Database links
Mature atr-miR8601
| Accession | MIMAT0033890 |
| Description | Amborella trichopoda atr-miR8601 mature miRNA |
| Sequence | 90 - UGCGAUUAGGUGUUGGAGUUU - 110 |
| Evidence |
experimental
Illumina [1] |
References
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