miRBase entry: atr-MIR8611

Stem-loop atr-MIR8611


Accession
MI0027501
Description
Amborella trichopoda atr-MIR8611 precursor miRNA


Sequence

151 reads, 1486 reads per million, 4 experiments
cggagcgcgguguuacauugucggaucgcucuuacgccaugccggagccccugugacagugguccguuaugguuUAAGGGCGCUCCGACAACGUGcuaug
...((((((........((((((((.((((((((.((((((.((((.((.(((...))).)))))).)))))).)))))))).))))))))))))))...

Structure
cgg      guguuaca        u        c      c    g  c   u 
   agcgcg        uugucgga cgcucuua gccaug cgga cc cug  
   ||||||        |||||||| |||||||| |||||| |||| || ||| g
   ucGUGC        AACAGCCU GCGGGAAU ugguau gccu gg gac  
gua      --------        C        u      u    -  u   a 


Annotation confidence High
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Genome context
scaffold00413: 4554-4653 [-]

Database links

Mature atr-miR8611

Accession MIMAT0033903
Description Amborella trichopoda atr-miR8611 mature miRNA
Sequence 75 - UAAGGGCGCUCCGACAACGUG - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089