Accession
MI0027508
Description
Amborella trichopoda
atr-MIR156d precursor miRNA
Gene family
MIPF0000008;
MIR156
Sequence
315
reads,
1154
reads per million, 4 experiments
agagccuuugaagcuuucucucucuaacaauuugcgguaagaaaggggguaguggguuaugcUGACAGAAGAGAGUGAGCACacauggccaauuguauaaccguaugccgcugucugugcgugcucacuccucuucuugucagcuuuaucauuucccgcuauugcuuugugccaugaccuccugcauucuccguucu
.((((.......)))).................((((..(((((((((((((((((..((((((((((((((((((((((((.(((((.((...(((((....)))))...)).))))).))))))))).)))))).)))))))......))..))))))...((.....))....)))))))...))))))))...
.((((.......)))).................((((..(((((((((((((((((..((((((((((((((((((((((((.(((((.((...(((((....)))))...)).))))).))))))))).)))))).)))))))......))..))))))...((.....))....)))))))...))))))))...
Structure
agagccuuugaagcuuucucucucuaacaauuu ua --- ---------------- uu ------ - - a c auu a
gcgg agaa agggggu aguggg au gcUGACA GAAGAG AGUGAGCAC caugg ca guaua c
|||| |||| ||||||| |||||| || ||||||| |||||| ||||||||| ||||| || |||||
ugcc ucuu uccucca ucgccc ua cgacugu cuucuc ucacucgug guguc gu cguau c
------------------------------ucu -- acg guaccguguuucguua uu cuauuu u c c u cgc g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00065: 3401522-3401718 [-]
Database links
Mature atr-miR156d
| Accession | MIMAT0033910 |
| Description | Amborella trichopoda atr-miR156d mature miRNA |
| Sequence | 63 - UGACAGAAGAGAGUGAGCAC - 82 |
| Evidence |
experimental
Illumina [1] |
References
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