Accession
MI0027514
Description
Amborella trichopoda
atr-MIR166b precursor miRNA
Gene family
MIPF0000004;
MIR166
Sequence
476014
reads,
191995
reads per million, 4 experiments
auggggggaaaaccuuuguguggaaugagguuugauccaagaucucuuuccauauguggaucaugugaacuugcaccuuugcauguuggcaaacccucuucuaugaauagaUCUCGGACCAGGCUUCAUUCCccacacugguuuuccacaauaaauugaaaccccau
((((((((((((((..((((.(((((((((((((.(((.((((((..(((.(((.(.(((...(((.(((.((((....)))).))).))).....))).))))))).)))))).))).))))))))))))).))))..)))))))).(((....)))...))))))
((((((((((((((..((((.(((((((((((((.(((.((((((..(((.(((.(.(((...(((.(((.((((....)))).))).))).....))).))))))).)))))).))).))))))))))))).))))..)))))))).(((....)))...))))))
Structure
-------------- uu u a a cu c u u --uca g u c
augggg ggaaaacc ugug ggaaugagguuug ucc agaucu uuc aua g gga ugu aac ugca c
|||||| |||||||| |||| ||||||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||
uacccc ccuuuugg acac CCUUACUUCGGAC AGG UCUaga aag uau c ucu acg uug acgu u
aaaguuaaauaaca uc c C C -u - - u cccaa g u u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00004: 1713840-1714006 [+]
Database links
Mature atr-miR166b
| Accession | MIMAT0033916 |
| Description | Amborella trichopoda atr-miR166b mature miRNA |
| Sequence | 112 - UCUCGGACCAGGCUUCAUUCC - 132 |
| Evidence |
experimental
Illumina [1] |
References
|
