Accession
MI0027516
Description
Amborella trichopoda
atr-MIR166d precursor miRNA
Gene family
MIPF0000004;
MIR166
Sequence
247330
reads,
69576
reads per million, 4 experiments
uguuguggggaauguuggcuggcucgaggccauccgauuuaggaaagccgcuucgguuggcauagucccgggugacaUCGGACCAGGCUUCAUUCCCCucaaaca
..(((.((((((((..(.((((.((((.(.((((((.....(((..(((((....).))))....))))))))).).)))).)))).)..)))))))).)))...
..(((.((((((((..(.((((.((((.(.((((((.....(((..(((((....).))))....))))))))).).)))).)))).)..)))))))).)))...
Structure
-ug u uu g c g c auuua --aa - u uug ggggaaug g cugg ucga g cauccg gga gccg c u ||| |||||||| | |||| |||| | |||||| ||| |||| | aac CCCCUUAC C GACC GGCU c gugggc ccu cggu g c aca u UU G A a a ----- gaua u g
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00128: 402266-402370 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from atr-MIR166d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature atr-miR166d
| Accession | MIMAT0033918 |
| Description | Amborella trichopoda atr-miR166d mature miRNA |
| Sequence | 78 - UCGGACCAGGCUUCAUUCCCC - 98 |
| Evidence |
experimental
Illumina [1] |
References
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