Accession
MI0027519
Description
Amborella trichopoda
atr-MIR169a precursor miRNA
Gene family
MIPF0000012;
MIR169_1
Sequence
79
reads,
127
reads per million, 3 experiments
gguauaacaugaagagacaguguuauuuugaUAGCCAAGGAUGACUUGCCUacauccacaauguggaugguucuagggugcuauggccccaauuaagacccucauuaugagguuucuaggcggucuccuuggcuaaccugacugacccugucuucuaugcuagacc
(((.((.((((..(((((((.((((.((.(.((((((((((.((((.((((((((((((...)))))))......(((.((....))))).........(((((...)))))....))))))))))))))))))).)..)).)))).))))))).)))).)).)))
(((.((.((((..(((((((.((((.((.(.((((((((((.((((.((((((((((((...)))))))......(((.((....))))).........(((((...)))))....))))))))))))))))))).)..)).)))).))))))).)))).)).)))
Structure
a a aa u u -u a U U ----------------------------------------------- a ggu ua caug gagacag guua uu g UAGCCAAGGA GACU GCCUa cauccac ||| || |||| ||||||| |||| || | |||||||||| |||| ||||| ||||||| a cca au guau uucuguc cagu ag c aucgguuccu cugg cggau guaggug g c -c c c uc a - - cuuuggaguauuacucccagaauuaaccccgguaucgugggaucuug u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
scaffold00016: 2808583-2808748 [-]
Database links
Mature atr-miR169a
| Accession | MIMAT0033921 |
| Description | Amborella trichopoda atr-miR169a mature miRNA |
| Sequence | 32 - UAGCCAAGGAUGACUUGCCU - 51 |
| Evidence |
experimental
Illumina [1] |
References
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