Accession
MI0027531
Description
Amborella trichopoda
atr-MIR390 precursor miRNA
Gene family
MIPF0000101;
MIR390
Sequence
2070
reads,
3046
reads per million, 4 experiments
gugaaaucaaagaaagcguugagaaucggUAAAGCUCAGGAGGGAUAGCGCCucuuuuuaaucugcauauauaacucagaucaauguugaggcgcuaucuauccugaguuuuacgguuucuccuugcucuguaaccuucau
(((((.....(((..(((..(((((.(.(((((((((((((.((((((((((((...((.(((((...........))))).))....)))))))))))).))))))))))))).).)))))..))))))......)))))
(((((.....(((..(((..(((((.(.(((((((((((((.((((((((((((...((.(((((...........))))).))....)))))))))))).))))))))))))).).)))))..))))))......)))))
Structure
-aucaa aa uu u g G -uuu a caua
gugaa aga gcg gagaa c gUAAAGCUCAGGA GGAUAGCGCCuc uu aucug u
||||| ||| ||| ||||| | ||||||||||||| |||||||||||| || ||||| a
uacuu ucu cgu cucuu g cauuuugaguccu ucuaucgcggag aa uagac u
ccaaug -- uc u g a uugu c ucaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00023: 136000-136140 [+]
Database links
Mature atr-miR390.1
| Accession | MIMAT0033933 |
| Description | Amborella trichopoda atr-miR390.1 mature miRNA |
| Sequence | 30 - UAAAGCUCAGGAGGGAUAGCG - 50 |
| Evidence |
experimental
Illumina [1] |
Mature atr-miR390.2
| Accession | MIMAT0033934 |
| Description | Amborella trichopoda atr-miR390.2 mature miRNA |
| Sequence | 32 - AAGCUCAGGAGGGAUAGCGCC - 52 |
| Evidence |
experimental
Illumina [1] |
References
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