Accession
MI0027532
Description
Amborella trichopoda
atr-MIR393 precursor miRNA
Gene family
MIPF0000083;
MIR393
Sequence
326
reads,
297
reads per million, 3 experiments
uuacgguggaguuacaaaagcgguuuugaucuaguaagaagcggauuugggguugcagaggguggagaaaUCCAAAGGGAUCGCAUUGAUCCuuuucagugcaagcgguuuuccaaggaucaugcggucucuuaggaugucuccaucuuaaugcaauaaaauugagcuccucuugugaaaagacauugaaggugguuucagguga
((((((.((((((.((((..((.((((.........)))).))..))))..((((((.((((((((((.((((.((((((((((((.(((((((......((.....)).....))))))))))))))))))).)))).))))))))))..)))))).......)))))).).)))))....((.((((((....))))))))..
((((((.((((((.((((..((.((((.........)))).))..))))..((((((.((((((((((.((((.((((((((((((.(((((((......((.....)).....))))))))))))))))))).)))).))))))))))..)))))).......)))))).).)))))....((.((((((....))))))))..
Structure
--------------------------- - u acaaaagcgguuuugaucuaguaagaagcggauuuggg -g a A U uucagu a
uuacg g ggaguu guugca aggguggaga aUCC AAGGGAUCGCAU GAUCCuu gc a
||||| | |||||| |||||| |||||||||| |||| |||||||||||| ||||||| || g
agugu c ccucga uaacgu uucuaccucu uagg uucucuggcgua cuaggaa ug c
aguggacuuugguggaaguuacagaaa u u -------------------------------guuaaaa aa g a - -ccuuu g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00009: 6768942-6769146 [+]
Database links
Mature atr-miR393
| Accession | MIMAT0033935 |
| Description | Amborella trichopoda atr-miR393 mature miRNA |
| Sequence | 71 - UCCAAAGGGAUCGCAUUGAUCC - 92 |
| Evidence |
experimental
Illumina [1] |
References
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