Accession
MI0027536
Description
Amborella trichopoda
atr-MIR396b precursor miRNA
Gene family
MIPF0000047;
MIR396
Sequence
14503
reads,
5856
reads per million, 4 experiments
uggugaaaauuuuggaauccaucguauuuUUCCACAGCUUUCUUGAACUUuauuaauaugagaagauugccgcuucguaaugcaaagcggaauauggaagaaaaagcucaagaaagcugugggaaaacaugaauguauucugguuaucg
.(((((.....(((((((.((((((.((((((((((((((((((((.((((.((..((((.........((((((.((...)).))))))..))))...)).)))).)))))))))))))))))))).))).))).)))))))))))).
.(((((.....(((((((.((((((.((((((((((((((((((((.((((.((..((((.........((((((.((...)).))))))..))))...)).)))).)))))))))))))))))))).))).))).)))))))))))).
Structure
u aaauu c - a A a -aa agaagauug c a gguga uuggaau cau cgu uuuUUCCACAGCUUUCUUGA CUUu uu uaug ccgcuu gu ||||| ||||||| ||| ||| |||||||||||||||||||| |||| || |||| |||||| || a cuauu ggucuua gua gua aaaagggugucgaaagaacu gaaa ag guau ggcgaa cg g ----- u a c c a aag -------aa a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00014: 2855195-2855343 [+]
Database links
Mature atr-miR396b
| Accession | MIMAT0033939 |
| Description | Amborella trichopoda atr-miR396b mature miRNA |
| Sequence | 30 - UUCCACAGCUUUCUUGAACUU - 50 |
| Evidence |
experimental
Illumina [1] |
References
|
