Stem-loop esi-MIR8618a

Accession

MI0027549

Description

Ectocarpus siliculosus esi-MIR8618a precursor miRNA

Gene family

MIPF0002066; MIR8618

Sequence

GUAUGGCCUGUGACCGCUCGaacagcuguucggccucaauguaauugcccuggcaugcaguacgacaaacgccagggcaaguacgaagaggcugagccacucuacgagcggucacaggccauaac
.(((((((((((((((((((...((..((((((((((..((((.((((((((((.((........))...)))))))))).))))..))))))))))..))...)))))))))))))))))))..

Structure

-G                   aac  cu          aa    a          --a  cag 
  UAUGGCCUGUGACCGCUCG   ag  guucggccuc  ugua uugcccuggc   ug   u
  |||||||||||||||||||   ||  ||||||||||  |||| ||||||||||   ||    
  auaccggacacuggcgagc   uc  cgagucggag  gcau aacgggaccg   ac   a
ca                   auc  ac          aa    g          caa  agc 

Annotation confidence Not enough data

Genome context

sctg_309: 18845-18969 [-]

Mature esi-miR8618a

• Accession: MIMAT0033952
• Description: Ectocarpus siliculosus esi-miR8618a mature miRNA
• Sequence: 1 - GUAUGGCCUGUGACCGCUCG - 20
• Evidence: experimental ; qPCR [1]

References

1. PubMed ID: 24078085
   Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
   "Billoud B, Nehr Z, Le Bail A, Charrier B"
   "Nucleic Acids Res (2014) 42:417-429