miRBase entry: esi-MIR8618b

Stem-loop esi-MIR8618b


Accession
MI0027550
Description
Ectocarpus siliculosus esi-MIR8618b precursor miRNA
Gene family
MIPF0002066; MIR8618


Sequence

UCGUACAGUGGCUCAGCCUCagcguacuugcccugguguugagucgcacugcauuccagggcaaguaccuugaggccgagcgacuguucga
(((.(((((.((((.(((((((.(((((((((((((.((..(((...)))..)).))))))))))))).))))))).)))).))))).)))

Structure
   U     G    A       c             u  ug   c 
UCG ACAGU GCUC GCCUCag guacuugcccugg gu  agu  
||| ||||| |||| ||||||| ||||||||||||| ||  ||| g
agc uguca cgag cggaguu caugaacgggacc ua  uca  
   u     g    c       c             u  cg   c 


Annotation confidence Not enough data
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Genome context
sctg_21: 631882-631972 [+]

Database links

Mature esi-miR8618b

Accession MIMAT0033953
Description Ectocarpus siliculosus esi-miR8618b mature miRNA
Sequence 1 - UCGUACAGUGGCUCAGCCUC - 20
Evidence experimental
qPCR [1]

References

  1. PubMed ID: 24078085
    Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
    "Billoud B, Nehr Z, Le Bail A, Charrier B"
    "Nucleic Acids Res (2014) 42:417-429