Stem-loop esi-MIR8626

Accession

MI0027561

Description

Ectocarpus siliculosus esi-MIR8626 precursor miRNA

Sequence

ggcGUCAGCAGCCGCCGCCGCgucauggagagacgcgaccccgucggcgccagacuggucaggauguccaggcgcggggggggcggcggcgauggcguc
(((((((...((((((((((((((.......)))))).((((.(((.((((....(((.((...)).)))))))))).))))))))))))..)))))))

Structure

       GCA        ---------------------------------------------      au 
ggcGUCA   GCCGCCGC                                             CGCguc  g
|||||||   ||||||||                                             ||||||  g
cugcggu   cggcggcg                                             gcgcag  a
       -ag        gggggggcgcggaccuguaggacuggucagaccgcggcugcccca      ag 

Annotation confidence Not enough data

Genome context

sctg_221: 252228-252326 [-]

Mature esi-miR8626

• Accession: MIMAT0033964
• Description: Ectocarpus siliculosus esi-miR8626 mature miRNA
• Sequence: 4 - GUCAGCAGCCGCCGCCGC - 21
• Evidence: experimental ; qPCR [1]

References

1. PubMed ID: 24078085
   Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
   "Billoud B, Nehr Z, Le Bail A, Charrier B"
   "Nucleic Acids Res (2014) 42:417-429