Stem-loop esi-MIR8630

Accession

MI0027566

Description

Ectocarpus siliculosus esi-MIR8630 precursor miRNA

Sequence

gacagcggcgacaucggcgacggaagucucgacgacggcacgucgaaagccgcuaccgacggcgacgccguCGCCGACGGUUGCCGCUGC
..((((((((((.((((((((((..(((((((((......))))))..(((((....).))))))).))))))))))..)))))))))).

Structure

ga          -a          aa   -----------------      ac 
  cagcggcgac  ucggcgacgg  guc                 ucgacg  g
  ||||||||||  ||||||||||  |||                 ||||||   
  GUCGCCGUUG  AGCCGCugcc  cag                 agcugc  g
-C          GC          -g   cggcagccaucgccgaa      ac 

Annotation confidence Not enough data

Genome context

sctg_10: 194069-194158 [-]

Mature esi-miR8630

• Accession: MIMAT0033969
• Description: Ectocarpus siliculosus esi-miR8630 mature miRNA
• Sequence: 72 - CGCCGACGGUUGCCGCUGC - 90
• Evidence: experimental ; qPCR [1]

References

1. PubMed ID: 24078085
   Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
   "Billoud B, Nehr Z, Le Bail A, Charrier B"
   "Nucleic Acids Res (2014) 42:417-429