Stem-loop esi-MIR8623b

Accession

MI0027569

Description

Ectocarpus siliculosus esi-MIR8623b precursor miRNA

Sequence

ccauggaguuccauggaguuccauggaaccaguccauggacaugaaacauuacaugggaguccauggaaguccauggaaaaaugaaaaguuuCAUGGAACUCCAUGGAACUCCAUGa
.((((((((((((((((((((((((((((...(((((((((........(..(((((....)))))..))))))))))..........)))))))))))))))))))))))))))).

Structure

c                            -------cag         augaaaca ua     g 
 cauggaguuccauggaguuccauggaac          uccauggac        u  caugg a
 ||||||||||||||||||||||||||||          |||||||||        |  |||||  
 GUACCUCAAGGUACCUCAAGGUACuuug          agguaccug        a  guacc g
a                            aaaaguaaaa         -------- ag     u 

Annotation confidence Not enough data

Genome context

sctg_40: 785188-785304 [+]

Mature esi-miR8623b

• Accession: MIMAT0033972
• Description: Ectocarpus siliculosus esi-miR8623b mature miRNA
• Sequence: 93 - CAUGGAACUCCAUGGAACUCCAUG - 116
• Evidence: experimental ; qPCR [1]

References

1. PubMed ID: 24078085
   Computational prediction and experimental validation of microRNAs in the brown alga Ectocarpus siliculosus
   "Billoud B, Nehr Z, Le Bail A, Charrier B"
   "Nucleic Acids Res (2014) 42:417-429