miRBase entry: gra-MIR8633

Stem-loop gra-MIR8633


Accession
MI0027574
Description
Gossypium raimondii gra-MIR8633 precursor miRNA


Sequence

gaaggacaacUAAGUGAAGAAAGAGGUAGGUUugaagaagaagaugguaagcugaguuuaagaggaauggugaacuuaauugagaucaucuucuccuaguuuucgucacaugaaccuuucuucauuuagaucuucaaaccagccuuuucuucacuuaguuguccuucc
(((((((((((((((((((((.(((((.((((((((((.(((((.(((....(((.......((((..(((((.(((....))).)))))...))))........))).....)))..))))).......)))))))))).)))))))))))))))))))))))))).

Structure
-                     A     A          ------a     -u   -aagc   -guuuaag    -au     a   a 
 gaaggacaacUAAGUGAAGAA GAGGU GGUUugaaga       gaaga  ggu     uga        agga   gguga cuu a
 ||||||||||||||||||||| ||||| ||||||||||       |||||  |||     |||        ||||   ||||| |||  
 cuuccuguugauucacuucuu uuccg ccaaacuucu       cuucu  cca     acu        uccu   cuacu gag u
c                     -     a          agauuua     uu   aguac   gcuuuuga    cuu     a   u 


Annotation confidence Not enough data
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Genome context
chr10: 6475834-6476001 [-]

Database links

Mature gra-miR8633

Accession MIMAT0033979
Description Gossypium raimondii gra-miR8633 mature miRNA
Sequence 11 - UAAGUGAAGAAAGAGGUAGGUU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629