Stem-loop gra-MIR7502b

Accession

MI0027608

Description

Gossypium raimondii gra-MIR7502b precursor miRNA

Gene family

MIPF0001869; MIR7502

Sequence

cuaguuauuuUUGUUAAAAGUUUCAUCCAUUuguacuauuaacauuggcuuaacugauaaaauaaucagauaauuauauuuacguauaaaaacuaauuuuuaacaauaaaaauagaugaaauuuuuaacaaaaugaccga
...((((((((.(((((((((((((((..(((((((...(((...(((.(((.(((((......))))).))))))...))).))))))).....(((((((....))))))).)))))))))))))))))))))))...

Structure

cua        U               ----------------------CA       uau   cau   c   a     aa 
   guuauuuU GUUAAAAGUUUCAUC                        UUuguac   uaa   ugg uua cugau  a
   |||||||| |||||||||||||||                        |||||||   |||   ||| ||| |||||   
   caguaaaa caauuuuuaaaguag                        aaauaug   auu   auu aau gacua  a
agc        -               auaaaaauaacaauuuuuaaucaa       --c   uau   -   a     au 

Annotation confidence Not enough data

Genome context

chr1: 614813-614952 [+]

Mature gra-miR7502b

• Accession: MIMAT0034013
• Description: Gossypium raimondii gra-miR7502b mature miRNA
• Sequence: 11 - UUGUUAAAAGUUUCAUCCAUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629