miRBase entry: gra-MIR8659a

Stem-loop gra-MIR8659a


Accession
MI0027623
Description
Gossypium raimondii gra-MIR8659a precursor miRNA


Sequence

ggcacaugguAAUUUUUUAAGGUUGUUUGUGGAAuaaaauuuuuuuacuaccaauguaccaaauaguaacccuaaaauaaaauaugaguuaguauuugguacacugacagugcauuuuuuuauuccgcaagcagccucaaaaacuugccacgugucu
(((((.((((((.(((((.((((((((((((((((((((......((((..((.(((((((((((.((((.(.............).)))).))))))))))).))..)))).....)))))))))))))))))))).))))).)))))).))))).

Structure
-     a      U     A                    uuuuuu    ac  a           g    c uaaaa 
 ggcac ugguAA UUUUU AGGUUGUUUGUGGAAuaaaa      uacu  ca uguaccaaaua uaac c     u
 ||||| |||||| ||||| ||||||||||||||||||||      ||||  || ||||||||||| |||| |     a
 cugug accguu aaaaa uccgacgaacgccuuauuuu      guga  gu acaugguuuau auug g     a
u     c      c     c                    -uuuac    ca  c           g    a uauaa 


Annotation confidence Not enough data
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Genome context
chr2: 60344590-60344746 [-]

Database links

Mature gra-miR8659a

Accession MIMAT0034028
Description Gossypium raimondii gra-miR8659a mature miRNA
Sequence 11 - AAUUUUUUAAGGUUGUUUGUGGAA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629