Stem-loop gra-MIR8662

Accession

MI0027627

Description

Gossypium raimondii gra-MIR8662 precursor miRNA

Sequence

auugaggugguagaauguucucugaaagcacgccuuguaagacgcacuuucagccuauacgacauccaagucaacuuaaaaugcguccuacagGGCGUACUUUCAGAGAACAUUUUGccaccuuauc
..((((((((((((((((((((((((((.((((((((((.((((((.(((.((.......(((......)))..)).))).)))))).)))))))))).))))))))))))))))))))))))))..

Structure

au                          c          a      c   c  ccuauac   au 
  ugaggugguagaauguucucugaaag acgccuugua gacgca uuu ag       gac  c
  |||||||||||||||||||||||||| |||||||||| |||||| ||| ||       |||   
  auuccaccGUUUUACAAGAGACUUUC UGCGGgacau cugcgu aaa uc       cug  c
cu                          A          c      a   u  -----aa   aa 

Annotation confidence Not enough data

Genome context

chr8: 50168684-50168810 [-]

Mature gra-miR8662

• Accession: MIMAT0034032
• Description: Gossypium raimondii gra-miR8662 mature miRNA
• Sequence: 94 - GGCGUACUUUCAGAGAACAUUUUG - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629