Stem-loop gra-MIR8677

Accession

MI0027643

Description

Gossypium raimondii gra-MIR8677 precursor miRNA

Sequence

uuuucugggcAAUGAAUCUAGGUUCUCUCUUgcuccauuuuuucauauuuuccuugugaaaauaugucuucaagagcguaagggagaaccuagauucauuacccagcaaaag
(((((((((.(((((((((((((((((((((((((........(((((((((.....))))))))).......))))..))))))))))))))))))))).))))).)))).

Structure

-    -     c                     --    cauuuuuu         c 
 uuuu cuggg AAUGAAUCUAGGUUCUCUCUU  gcuc        cauauuuuc u
 |||| ||||| |||||||||||||||||||||  ||||        ||||||||| u
 aaaa gaccc uuacuuagauccaagagggaa  cgag        guauaaaag g
g    c     a                     ug    -aacuucu         u 

Annotation confidence Not enough data

Genome context

KB204168.1: 8447-8558 [+]

Mature gra-miR8677

• Accession: MIMAT0034048
• Description: Gossypium raimondii gra-miR8677 mature miRNA
• Sequence: 11 - AAUGAAUCUAGGUUCUCUCUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629