Stem-loop gra-MIR8679

Accession

MI0027645

Description

Gossypium raimondii gra-MIR8679 precursor miRNA

Sequence

aaaaggaacacuuguuacaucguuaacccacuuguggaaacucuacaaggcuauggaguuuuuuagacuccACAAGCGAGUUAAGGAUGUGACAAguguccuaua
...((((.(((((((((((((.(((((.(.((((((((...((((.((((((....)))))).)))).)))))))).).))))).)))))))))))))))))...

Structure

aaa    a             g     c a        aac    c      a 
   agga cacuuguuacauc uuaac c cuugugga   ucua aaggcu u
   |||| ||||||||||||| ||||| | ||||||||   |||| ||||||  
   uccu gugAACAGUGUAG AAUUG G GAACAccu   agau uuuuga g
aua    -             G     A C        --c    u      g 

Annotation confidence Not enough data

Genome context

chr1: 47791983-47792087 [+]

Mature gra-miR8679

• Accession: MIMAT0034050
• Description: Gossypium raimondii gra-miR8679 mature miRNA
• Sequence: 72 - ACAAGCGAGUUAAGGAUGUGACAA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629