Stem-loop gra-MIR8682

Accession

MI0027648

Description

Gossypium raimondii gra-MIR8682 precursor miRNA

Sequence

gucuccugaauuugucgagagcccaagcugguuuacagagucacuuuacagagagccuaaggcacucuggcucuaugaacccgucaccauaucaggcuuuugguagaguuauuuugugaACUAGCUCAGGCUCUCGGCAGgguugggaga
.((((((((.(((((((((((((..((((((((((((((((.(((((((.((((((((.........((((...........)))).......)))))))).))))))).))))))))))))))))..))))))))))))).))))))))

Structure

g        a             ca                c       a        aaggcacuc    ucua 
 ucuccuga uuugucgagagcc  agcugguuuacagagu acuuuac gagagccu         uggc    u
 |||||||| |||||||||||||  |||||||||||||||| ||||||| ||||||||         ||||    g
 agaggguu gGACGGCUCUCGG  UCGAUCAaguguuuua ugagaug uuuucgga         acug    a
-        g             AC                u       g        --cuauacc    ccca 

Annotation confidence Not enough data

Genome context

chr10: 61924019-61924168 [+]

Mature gra-miR8682

• Accession: MIMAT0034053
• Description: Gossypium raimondii gra-miR8682 mature miRNA
• Sequence: 120 - ACUAGCUCAGGCUCUCGGCAG - 140
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629