miRBase entry: gra-MIR8694b

Stem-loop gra-MIR8694b


Accession
MI0027670
Description
Gossypium raimondii gra-MIR8694b precursor miRNA


Sequence

ggcuccaagcAGGAUGCACUGUCAGCAAAAGUAUugaaaaagcuccuagcuggaugcccuuuucaguaguguuggugacagugcauccuacuuggggua
.((((((((.((((((((((((((.(((.(.(((((((((.(((((.....))).))..))))))))).).))).)))))))))))))).)))))))).

Structure
g        c              G   A G         -a  -   u 
 gcuccaag AGGAUGCACUGUCA CAA A UAUugaaaa  gc ucc a
 |||||||| |||||||||||||| ||| | |||||||||  || ||| g
 ugggguuc uccuacgugacagu guu u augacuuuu  cg agg c
a        a              g   g g         cc  u   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr7: 44961570-44961668 [+]

Database links

Mature gra-miR8694b

Accession MIMAT0034075
Description Gossypium raimondii gra-miR8694b mature miRNA
Sequence 11 - AGGAUGCACUGUCAGCAAAAGUAU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629