miRBase entry: gra-MIR8726

Stem-loop gra-MIR8726


Accession
MI0027715
Description
Gossypium raimondii gra-MIR8726 precursor miRNA


Sequence

cagcucgagguuuugucuccugauuccaucgagagcagcacgggauucacuugaucagguuaucagcacaaucagacaaggcacccccacuccgcaaaucccgcacgguucuCGAUGGAGUCUGGAGACAAAAcccagaccaa
..(.((..((((((((((((.(((((((((((((((.(..(((((((..((((.((.((((........)))).))))))((...........)).)))))))..).))))))))))))))).))))))))))))..)).)..

Structure
ca c  ga            u               a ca       --------------ca    a  a    auc 
  g uc  gguuuugucucc gauuccaucgagagc g  cgggauu                cuug uc gguu   a
  | ||  |||||||||||| ||||||||||||||| |  |||||||                |||| || ||||    
  c ag  ccAAAACAGAGG CUGAGGUAGCucuug c  gcccuaa                gaac ag cuaa   g
aa c  ac            U               g ac       acgccucacccccacg    -  a    cac 


Annotation confidence Not enough data
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Genome context
chr5: 61906313-61906455 [-]

Database links

Mature gra-miR8726

Accession MIMAT0034120
Description Gossypium raimondii gra-miR8726 mature miRNA
Sequence 113 - CGAUGGAGUCUGGAGACAAAA - 133
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629