Stem-loop gra-MIR7492i

Accession

MI0027721

Description

Gossypium raimondii gra-MIR7492i precursor miRNA

Gene family

MIPF0001661; MIR7492

Sequence

ggcguuuucuggagaagcgccgcuaaagaucauuaucguuagcggcguuuguuuuguaagugccgcuaaagaccaugaccuuuagcgguguuugucauaaaagugucguuaaagagCGUGAUCUUUAGCGGCGUUUGugggaaaagc
.((.((((((.(..(((((((((((((((((((..((.((((((((((((....(((((((((((((((((........))))))))))))))).))...)))))))))))).))..))))))))))))))))))).).))))))))

Structure

g  g      g ag                   ua  g            guuu  -               acc 
 gc uuuucu g  aagcgccgcuaaagaucau  uc uuagcggcguuu    ug uaagugccgcuaaag   a
 || |||||| |  |||||||||||||||||||  || ||||||||||||    || |||||||||||||||    
 cg aaaagg u  UUUGCGGCGAUUUCUAGUG  ag aauugcugugaa    ac guuuguggcgauuuc   u
-  -      g -G                   Cg  a            -aau  u               cag 

Annotation confidence Not enough data

Genome context

chr3: 28533659-28533805 [+]

Mature gra-miR7492i

• Accession: MIMAT0034126
• Description: Gossypium raimondii gra-miR7492i mature miRNA
• Sequence: 117 - CGUGAUCUUUAGCGGCGUUUG - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629