miRBase entry: gra-MIR7502d

Stem-loop gra-MIR7502d


Accession
MI0027731
Description
Gossypium raimondii gra-MIR7502d precursor miRNA
Gene family
MIPF0001869; MIR7502


Sequence

uguuaaaaguuucauccauuuguacuguuaagaacuggcuugguugauaguuuaaucagauaacgacauaugguaugccagguguaacucauguugacauauaaaaacuagCUUUUAACAGUAGAAUUUGAUGGAauuuuuaaca
((((((((((((((((...((.(((((((((((.((((.((((((((....))))))))....((((((..(.(((((...))))).)..))))))...........)))).))))))))))).))...))))))))))))))))

Structure
                cau  g           a    cuugguugauaguuuaaucagauaa      au g     c 
uguuaaaaguuucauc   uu uacuguuaaga cugg                         cgacau  g uaugc  
||||||||||||||||   || ||||||||||| ||||                         ||||||  | ||||| a
acaauuuuuaAGGUAG   AA AUGACAAUUUU gauc                         guugua  c augug  
                UUU  G           C    --------------aaaaauauaca      cu a     g 


Annotation confidence Not enough data
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Genome context
chr4: 61154822-61154966 [+]

Database links

Mature gra-miR7502d

Accession MIMAT0034136
Description Gossypium raimondii gra-miR7502d mature miRNA
Sequence 112 - CUUUUAACAGUAGAAUUUGAUGGA - 135
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629