Stem-loop gra-MIR8733

Accession

MI0027733

Description

Gossypium raimondii gra-MIR8733 precursor miRNA

Sequence

aaguuuggaaGAGCUUGGAAGUGCAUCCGGCuggacaaguuuucaugcugauauguuuggaaaacucgccuagcuggaugccuuuucaagcucuuucuccgaaacug
.((((((((((((((((((((.((((((((((((.(.(((((((..((......))...))))))).).)))))))))))).))))))))))))...))).))))).

Structure

a     -   ---            U            a a       -au  ug 
 aguuu gga   aGAGCUUGGAAG GCAUCCGGCugg c aguuuuc   gc  a
 ||||| |||   |||||||||||| |||||||||||| | |||||||   ||   
 ucaaa ccu   ucucgaacuuuu cguaggucgauc g ucaaaag   ug  u
g     g   cuu            c            c c       guu  ua 

Annotation confidence Not enough data

Genome context

chr10: 815811-815917 [-]

Mature gra-miR8733

• Accession: MIMAT0034138
• Description: Gossypium raimondii gra-miR8733 mature miRNA
• Sequence: 11 - GAGCUUGGAAGUGCAUCCGGC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629