Stem-loop gra-MIR8747

Accession

MI0027766

Description

Gossypium raimondii gra-MIR8747 precursor miRNA

Sequence

ucccaucaaccugcacaaucagcuugcaauggggaaauguccaacgcauagaucaaacguccagaacauccgauagaagacucuuuuUCCCAGUUGUAGUUGGUCGUUCGGgccauaauaa
(((((((((.(((......))).)))..))))))..((((.....)))).........((((.((((..(((((....((((.........))))...)))))..))))))))........

Structure

ucccaucaaccugcacaaucagcuugcaauggggaaauguccaacgcauagaucaaac    a    au     agaa    cuu 
                                                          gucc gaac  ccgau    gacu   u
                                                          |||| ||||  |||||    ||||   u
                                                          cgGG CUUG  GGUUG    UUGA   U
--------------------------------------------------aauaauac    -    CU     -AUG    CCC 

Annotation confidence Not enough data

Genome context

chr11: 21522773-21522893 [-]

Mature gra-miR8747

• Accession: MIMAT0034171
• Description: Gossypium raimondii gra-miR8747 mature miRNA
• Sequence: 88 - UCCCAGUUGUAGUUGGUCGUUCGG - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629