miRBase entry: gra-MIR8750

Stem-loop gra-MIR8750


Accession
MI0027771
Description
Gossypium raimondii gra-MIR8750 precursor miRNA


Sequence

aaggccauggUCUUAGUUGGCAUAUACUCAAGGAgcacgcagaagggagacaagcaacccagagugaagcauguguccagcaugccugaaguccgcucagaaugucaguccuaagaaaaaugggucaagucaugaaaaguggucucccuucugcgagcucauugaguauaugcgaacugagaccgcggucuuc
((((((.(((((((((((.((((((((((((.((((.((((((((((((((.....(((((((.(((.((((((.....))))))((((.......))))....))).))..........))))).....(((.....))))))))))))))))).)))).)))))))))))).))))))))))).)))))).

Structure
-      a           G            G    a              -----------aagca     ----------  g   ------------------a      g 
 aaggcc uggUCUUAGUU GCAUAUACUCAA GAgc cgcagaagggagac                accca          ga uga                   gcaugu u
 |||||| ||||||||||| |||||||||||| |||| ||||||||||||||                |||||          || |||                   |||||| c
 uucugg gccagagucaa cguauaugaguu cucg gcgucuucccucug                ugggu          cu acu                   cguacg c
c      c           g            a    a              gugaaaaguacugaac     aaaaagaauc  g   guaagacucgccugaaguc      a 


Annotation confidence Not enough data
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Genome context
chr7: 13744384-13744576 [+]

Database links

Mature gra-miR8750

Accession MIMAT0034176
Description Gossypium raimondii gra-miR8750 mature miRNA
Sequence 11 - UCUUAGUUGGCAUAUACUCAAGGA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629