Stem-loop gra-MIR8759

Accession

MI0027784

Description

Gossypium raimondii gra-MIR8759 precursor miRNA

Sequence

aaccccucaaUGGUGGAAGUAUUGUGCCCGGgguguuuaugcuagguuuuagccccggguuuuaucuuuugguuccaaggagagcccaacggguucccagaguuuggggagcgccucaccaucaagcauagagauaccccaagcacaauaccuccaccguugaaggguuc
(((((.(((((((((((.(((((((((..((((((((((((((.(((....)))..(((((((.((((........)))))))))))...((((((((........)))))).)).........))))))..))))))))..))))))))).))))))))))).))))).

Structure

-     c           A         CC        --      ------------------------agguuuuagcccc       a    uug 
 aaccc ucaaUGGUGGA GUAUUGUGC  GGgguguu  uaugcu                                     ggguuuu ucuu   g
 ||||| ||||||||||| |||||||||  ||||||||  ||||||                                     ||||||| ||||    
 uuggg aguugccaccu cauaacacg  ccccauag  auacga                                     cccgaga ggaa   u
c     a           c         aa        ag      acuaccacuccgcgagggguuugagacccuugggcaa       -    ccu 

Annotation confidence Not enough data

Genome context

chr6: 33149646-33149815 [-]

Mature gra-miR8759

• Accession: MIMAT0034189
• Description: Gossypium raimondii gra-miR8759 mature miRNA
• Sequence: 11 - UGGUGGAAGUAUUGUGCCCGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629