miRBase entry: gra-MIR7502e

Stem-loop gra-MIR7502e


Accession
MI0027788
Description
Gossypium raimondii gra-MIR7502e precursor miRNA
Gene family
MIPF0001869; MIR7502


Sequence

aguuaaaauauuuaucuauuuuuacuguuaaaaauuggcguagcugacacauggcuuugucacauguaccucauggcaauguacaaagaccaguucUUAACGGUAGAAAUGGAUGAAuuuuuuaaca
.(((((((.((((((((((((((((((((((.((((((.((.....))......((((((.((((...((....))..)))))))))).)))))).)))))))))))))))))))))).))))))).

Structure
a       u                      a      cguagcugacacaugg      c    gua  u 
 guuaaaa auuuaucuauuuuuacuguuaa aauugg                cuuugu acau   cc c
 ||||||| |||||||||||||||||||||| ||||||                |||||| ||||   ||  
 caauuuu uAAGUAGGUAAAGAUGGCAAUU uugacc                gaaaca ugua   gg a
a       u                      c      ---------------a      -    -ac  u 


Annotation confidence Not enough data
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Genome context
chr13: 57171412-57171538 [-]

Database links

Mature gra-miR7502e

Accession MIMAT0034193
Description Gossypium raimondii gra-miR7502e mature miRNA
Sequence 97 - UUAACGGUAGAAAUGGAUGAA - 117
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629