miRBase entry: gra-MIR8764

Stem-loop gra-MIR8764


Accession
MI0027793
Description
Gossypium raimondii gra-MIR8764 precursor miRNA


Sequence

guacuaagggUUAGAUUGCAUUUUACCCCUUuuacugaaaaacaugggccgguuugcucuuugauuuuguauagggacuaauuugcucuuuuuuuaaguaaaggggcaaaaugcaaucaaacuuaguaca
((((((((.....(((((((((((.(((((((.(((((((((...((((.((((.(((((.((......)).)))).).)))).)))).)))))).)))))))))).)))))))))))...)))))))).

Structure
-        ggUUA           A       u   -      cau    c    u -    u  au 
 guacuaag     GAUUGCAUUUU CCCCUUu acu gaaaaa   gggc gguu g cucu ug  u
 ||||||||     ||||||||||| ||||||| ||| ||||||   |||| |||| | |||| ||   
 caugauuc     cuaacguaaaa ggggaaa uga uuuuuu   cucg uuaa c ggga au  u
a        --aaa           c       -   a      --u    u    u a    u  gu 


Annotation confidence Not enough data
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Genome context
chr12: 33216943-33217072 [-]

Database links

Mature gra-miR8764

Accession MIMAT0034198
Description Gossypium raimondii gra-miR8764 mature miRNA
Sequence 11 - UUAGAUUGCAUUUUACCCCUU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629