Stem-loop gra-MIR7484h

Accession

MI0027810

Description

Gossypium raimondii gra-MIR7484h precursor miRNA

Gene family

MIPF0001667; MIR7484

Sequence

uauuaaaaauuucauccauuuguauuguuaaaaacuggucuggcugacagaauaaccaaauagagacauguaaugugcuauguauaccucacacugacguacauggaucaauuUUUAACCGUAGAAAUGGAUGAaauuuuuaau
.((((((((((((((((((((.(((.((((((((.(((((((.....))))....)))....((..((((((.(((.(..(((.......)))..))))))))))..))..)))))))).))).))))))))))))))))))))

Structure

u                    g   u        cuggucuggcugacagaauaaccaaaua  ga      a   g ua   au 
 auuaaaaauuucauccauuu uau guuaaaaa                            ga  caugua ugu c  ugu  a
 |||||||||||||||||||| ||| ||||||||                            ||  |||||| ||| |  |||  c
 uaauuuuuaaAGUAGGUAAA AUG CAAUUUuu                            cu  guacau gca g  aca  c
-                    G   C        --------------------------aa  ag      -   - uc   cu 

Annotation confidence Not enough data

Genome context

chr2: 61887427-61887570 [+]

Mature gra-miR7484h

• Accession: MIMAT0034215
• Description: Gossypium raimondii gra-miR7484h mature miRNA
• Sequence: 114 - UUUAACCGUAGAAAUGGAUGA - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629