miRBase entry: gra-MIR8777

Stem-loop gra-MIR8777


Accession
MI0027818
Description
Gossypium raimondii gra-MIR8777 precursor miRNA


Sequence

aucucuucauUUUCCAAUAGAAGAAUGACAaaucgaauuuuucuuccuaauuuuuagcaguguuacaggagaaaaaaaaguugaaaauuaugaggaaaaaauccaauuugucauucuucuauugaaaaugaauagggaua
((((((((((((((.((((((((((((((((((.((.(((((((((.(((((((((((.....................))))))))))).))))))))).))..))))))))))))))))))))))))))..)))))).

Structure
-      --        C                  -c  a         c           aguguuaca 
 aucucu  ucauUUUC AAUAGAAGAAUGACAaau  ga uuuuucuuc uaauuuuuagc         g
 ||||||  |||||||| ||||||||||||||||||  || ||||||||| |||||||||||         g
 uaggga  aguaaaag uuaucuucuuacuguuua  cu aaaaaggag auuaaaaguug         a
a      ua        -                  ac  a         u           aaaaaaaag 


Annotation confidence Not enough data
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Genome context
chr4: 12069781-12069920 [-]

Database links

Mature gra-miR8777

Accession MIMAT0034223
Description Gossypium raimondii gra-miR8777 mature miRNA
Sequence 11 - UUUCCAAUAGAAGAAUGACA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629