Stem-loop gra-MIR7492f

Accession

MI0027844

Description

Gossypium raimondii gra-MIR7492f precursor miRNA

Gene family

MIPF0001661; MIR7492

Sequence

uuugugauagaagcgcugcuaaaggucaugaucuuuagcggcguuugugauagaagcgcugcuaaaggucauuaucuuuagcggcguuugugauaaaagcaccgcuaaaggCCAUGAUCUUUAGCGGCGUUUuuuucacaua
..(((((.((((((((((((((((((((((.((((((((((.((((....((.((((((((((((((((....)))))))))))))))).))....)))).)))))))))).)))))))))))))))))))))).)))))..

Structure

uu     u                      a          c    guga  g                c 
  uguga agaagcgcugcuaaaggucaug ucuuuagcgg guuu    ua aagcgcugcuaaaggu a
  ||||| |||||||||||||||||||||| |||||||||| ||||    || ||||||||||||||||  
  acacu uuUUUGCGGCGAUUUCUAGUAC ggaaaucgcc cgaa    gu uuugcggcgauuucua u
au     u                      C          a    aaua  g                u 

Annotation confidence Not enough data

Genome context

chr5: 27401230-27401371 [-]

Mature gra-miR7492f

• Accession: MIMAT0034249
• Description: Gossypium raimondii gra-miR7492f mature miRNA
• Sequence: 112 - CCAUGAUCUUUAGCGGCGUUU - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629