miRBase entry: gra-MIR8718

Stem-loop gra-MIR8718


Accession
MI0027856
Description
Gossypium raimondii gra-MIR8718 precursor miRNA


Sequence

uaaggaguugAUUUUGGAAGAAUUUCAGCUGguugugccaccaaugguagaacagcugcggguuuuauugguacguuggugacucaaccgguuggaacucuuccaaaaucaacuccggg
...((((((((((((((((((.(((((((((((((.(.(((((((((((((((........))))))).....)))))))).).))))))))))))).))))))))))))))))))...

Structure
uaa                  A             u c        -----       agc 
   ggaguugAUUUUGGAAGA UUUCAGCUGguug g caccaaug     guagaac   u
   |||||||||||||||||| ||||||||||||| | ||||||||     |||||||    
   ccucaacuaaaaccuucu aagguuggccaac c gugguugc     uauuuug   g
ggg                  c             u a        auggu       ggc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 2333245-2333363 [-]

Database links

Mature gra-miR8718

Accession MIMAT0034261
Description Gossypium raimondii gra-miR8718 mature miRNA
Sequence 11 - AUUUUGGAAGAAUUUCAGCUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629