miRBase entry: cfa-mir-8792

Stem-loop cfa-mir-8792


Accession
MI0027872
Description
Canis familiaris cfa-mir-8792 precursor miRNA


Sequence

gagaguacuguuucugauucuuucauuuguguuguggugaguucuuccuucuagucauuuugcucagugcagaguggcugUAUGAGCAGGCUGAGUUAAGAAUAUcaaccacgaccuaaguaaauuucacccuaagugauucugc
.((((((((.....(((...(((.(((((.((((((((((((((((..(((.((((....((((((.(((((.....))))))))))))))))))..)))))).)).)))))))).))))))))..))).....))).)))))..

Structure
-g     -   guuuc   uuc   c     u        -  -      cc   u    auuu      g     a 
  agagu acu     uga   uuu auuug guuguggu ga guucuu  uuc aguc    ugcuca ugcag g
  ||||| |||     |||   ||| ||||| |||||||| || ||||||  ||| ||||    |||||| ||||| u
  ucuua uga     acu   aaa ugaau cagcacca cU UAAGAA  GAG UCGG    ACGAGU AUguc g
cg     g   auccc   -uu   -     c        a  A      UU   -    ----      -     g 


Annotation confidence Not enough data
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Genome context
chr30: 3219341-3219485 [-]

Database links

Mature cfa-miR-8792

Accession MIMAT0034282
Description Canis familiaris cfa-miR-8792 mature miRNA
Sequence 81 - UAUGAGCAGGCUGAGUUAAGAAUAU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545