miRBase entry: cfa-mir-8801

Stem-loop cfa-mir-8801


Accession
MI0027881
Description
Canis familiaris cfa-mir-8801 precursor miRNA


Sequence

uaaaggccagggaccugcugcucacUGGACAGUCAUUGUAUAGAGGAUGGcuccaggcuccacacauccacugcgagacuguuguacguaggcaugagggggggcuaccacagaa
....((((.....(((..((((.((..(((((((.((((..((.(((((...............))))).)))))))))))))....)).))))..)))...)))).........

Structure
-----uaaa    aggga   gc    c  --UG       A    AU  A     Gcucca 
         ggcc     ccu  ugcu ac    GACAGUC UUGU  AG GGAUG      g
         ||||     |||  |||| ||    ||||||| ||||  || |||||      g
         ucgg     gga  acgg ug    uugucag agcg  uc ccuac      c
aagacacca    --ggg   gu    a  caug       -    --  a     acaccu 


Annotation confidence Not enough data
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Genome context
chr20: 43603630-43603744 [+]

Database links

Mature cfa-miR-8801

Accession MIMAT0034291
Description Canis familiaris cfa-miR-8801 mature miRNA
Sequence 26 - UGGACAGUCAUUGUAUAGAGGAUGG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545