Stem-loop cfa-mir-8816

Accession

MI0027896

Description

Canis familiaris cfa-mir-8816 precursor miRNA

Sequence

ccagggcuggaaggggccucggagagugucaggcuaccuagagucacacacugaguugguggcuggguuggaacUAGAAUCCAGGUCAUGUGACUCCCgguucaggaucacucucaccuugcucacuugugca
.....((.(.(((((((....(((((((((..(..(((..((((((((...(((.((((...((((.......))))...)))).)))))))))))..))).)..)).))))))).....)))).))).))).

Structure

ccagg  u g   -    -cucg       -  ag cu   ua        cac   g    ugg    gu 
     gc g aag gggc     gagagug uc  g  acc  gagucaca   uga uugg   cugg  u
     || | ||| ||||     ||||||| ||  |  |||  ||||||||   ||| ||||   ||||  g
     cg u uuc cucg     cucucac ag  c  ugg  CUCAGUGU   ACU GACC   GAUc  g
----a  - g   a    uucca       u  ga -u   CC        ---   G    UAA    aa 

Annotation confidence Not enough data

Genome context

chr28: 15916916-15917048 [+]

Mature cfa-miR-8816

• Accession: MIMAT0034306
• Description: Canis familiaris cfa-miR-8816 mature miRNA
• Sequence: 75 - UAGAAUCCAGGUCAUGUGACUCCC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545