miRBase entry: cfa-mir-8815-2

Stem-loop cfa-mir-8815-2


Accession
MI0027897
Description
Canis familiaris cfa-mir-8815-2 precursor miRNA
Gene family
MIPF0002138; mir-8815


Sequence

gcgcugggccaagcuccccacagcugacuucugcuUGCCAGUGGCCUGCGGGGGACGGuggcaccacgagccucuccucagcagaaggcggcuggcaggcccggcagccugugggccuuacugcugugcgu
((((..(((.(((...((((((((((.((...((((((((((.((((((.(((((.((.(((.......)))))))))).))...)))).))))))))))..))))).))))))).)))...)))..))))

Structure
    ug   --c   cuc       -   a  ucu          G    ---  G     C  u   ac 
gcgc  ggc   aag   cccacag cug cu   gcuUGCCAGU GCCU   GC GGGGA GG ggc  c
||||  |||   |||   ||||||| ||| ||   |||||||||| ||||   || ||||| || |||  a
ugcg  ucg   uuc   ggguguc gac gg   cggacggucg cgga   cg cuccu cu ccg  c
    ug   uca   --c       c   -  -cc          g    aga  a     -  -   ag 


Annotation confidence Not enough data
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Genome context
chr28: 6819312-6819442 [-]

Database links

Mature cfa-miR-8815

Accession MIMAT0034305
Description Canis familiaris cfa-miR-8815 mature miRNA
Sequence 36 - UGCCAGUGGCCUGCGGGGGACGG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545