Stem-loop cfa-mir-8819

Accession

MI0027900

Description

Canis familiaris cfa-mir-8819 precursor miRNA

Sequence

ccaggcggagugggaugacuaugugcccaaacucugugaacagcugucugggaaguagggcagugcugggagacaguagcUGUCCCAGAAGUCUCAAGCAGUGUUcucaaguucagugaugcauguagauuucuccacuuucccu
..(((.(((((((((...((((((((.((((((.((.(((((.((((.(((((....(((((((((((.....))))).))))))......))))).))))))))).))))))...))..))))))))...)).))))))).)))

Structure

cc   c       -  uga        -c  ---    c  u     g    c     --agua      -     g 
  agg ggagugg ga   cuaugugc  ca   aacu ug gaaca cugu uggga      gggcag ugcug g
  ||| ||||||| ||   ||||||||  ||   |||| || ||||| |||| |||||      |||||| ||||| a
  ucc uuucacc cu   gauguacg  gu   uuga ac cUUGU GACG ACUCU      CCUGUc augac g
--   c       u  uua        ua  gac    -  u     -    A     GAAGAC      g     a 

Annotation confidence Not enough data

Genome context

chr26: 14526313-14526457 [+]

Mature cfa-miR-8819

• Accession: MIMAT0034309
• Description: Canis familiaris cfa-miR-8819 mature miRNA
• Sequence: 81 - UGUCCCAGAAGUCUCAAGCAGUGUU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545