miRBase entry: cfa-mir-8830-2

Stem-loop cfa-mir-8830-2


Accession
MI0027915
Description
Canis familiaris cfa-mir-8830-2 precursor miRNA
Gene family
MIPF0001924; mir-8830


Sequence

ccggcuucccUCGUCGCUGAGGCAGGACCGACUUCccucauggccgaggcaggaccggcuucccucauggccgaggcagacccgg
((((.((.((((((((.(((((.(((.(((.(((.((((......)))).)))..)))))).)))))))).)))))..)).))))

Structure
    c  -c     -   C     C   A   -A   C    au 
ccgg uu  ccUCG UCG UGAGG AGG CCG  CUU ccuc  g
|||| ||  ||||| ||| ||||| ||| |||  ||| ||||   
ggcc ag  ggagc ggu acucc uuc ggc  gga ggag  g
    c  ac     c   -     c   -   ca   c    cc 


Annotation confidence Not enough data
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Genome context
chr11: 14017075-14017159 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cfa-mir-8830-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-8830

Accession MIMAT0034323
Description Canis familiaris cfa-miR-8830 mature miRNA
Sequence 11 - UCGUCGCUGAGGCAGGACCGACUUC - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545