Stem-loop cfa-mir-8843

Accession

MI0027929

Description

Canis familiaris cfa-mir-8843 precursor miRNA

Sequence

uacgcucuguguacuuuaaccuaaugggggucguccgggagucggaagggggaggggagagggaggaggcagccaaggaaUUGUUUUUUUCUCUCGCCCCGCCUGcgccaggccggccaauggcgacggguuguuuacccaggag
(((((...)))))......(((....)))((((.(((...(((((..(.(((.((((.((((((((((((((........))))))))))).))).)))).))).)......)))))...)))))))((((.....)))).....

Structure

uacgcucuguguacuuuaaccuaaugggg    u   gga     ----aa g   a    a   -           cca 
                             gucg ccg   gucgg      g ggg gggg gag ggaggaggcag   a
                             |||| |||   |||||      | ||| |||| ||| |||||||||||    
                             cagc ggu   cggcc      c UCC CCCC CUC CUUUUUUUGUU   g
-----------gaggacccauuuguuggg    -   aac     ggaccg G   G    G   U           aag 

Annotation confidence Not enough data

Genome context

chr17: 38744548-38744692 [-]

Mature cfa-miR-8843

• Accession: MIMAT0034336
• Description: Canis familiaris cfa-miR-8843 mature miRNA
• Sequence: 81 - UUGUUUUUUUCUCUCGCCCCGCCUG - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545