Stem-loop cfa-mir-8845

Accession

MI0027932

Description

Canis familiaris cfa-mir-8845 precursor miRNA

Sequence

agaucuagaugccacaggaugcauccuccacauucUGCAAGGCAGGACCGACACCcucacccguggcuggcugugggucccuggcugccuugcgcugcuaacgaacccugggugugccucugugu
............((((((..((((.(.(((..(((((((((((((((((.(((.((...((...))..)).))).))))).....)))))))))........)))...)))).)))).)))))).

Structure

agaucuagaugc      au    c u   -ca   --------         -----     G   C  uca  c 
            cacagg  gcau c cca   uuc        UGCAAGGCA     GGACC ACA Cc   cc  
            ||||||  |||| | |||   |||        |||||||||     ||||| ||| ||   || g
            gugucu  cgug g ggu   aag        gcguuccgu     ccugg ugu gg   gg  
-----------u      -c    u -   ccc   caaucguc         cgguc     g   c  -uc  u 

Annotation confidence Not enough data

Genome context

chr17: 13107265-13107389 [+]

Mature cfa-miR-8845

• Accession: MIMAT0034339
• Description: Canis familiaris cfa-miR-8845 mature miRNA
• Sequence: 36 - UGCAAGGCAGGACCGACACC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545