miRBase entry: cfa-mir-8846

Stem-loop cfa-mir-8846


Accession
MI0027933
Description
Canis familiaris cfa-mir-8846 precursor miRNA


Sequence

uucaaaccuaggagguucccaccaccuuaucacgccgcaauggccggacccugaggcuggcagguccuggcaggugcuggCGGGACAGAUGUGGCCUCAGAUCAUggccucuggaaggcuagugggguggaggcagcauccaccg
..........(((.(((.((.(((((((((...(((.((..(((((....(((((((((....((((((.(((...))).)))))).....)))))))))....)))))..))...)))..))))))))).)).))).)))....

Structure
uucaaaccua   g   c  a         cac   --g  au     gacc         -gcag      g   g 
          gga guu cc ccaccuuau   gcc   ca  ggccg    cugaggcug     guccug cag  
          ||| ||| || |||||||||   |||   ||  |||||    |||||||||     |||||| ||| u
          ccu cga gg gguggggug   cgg   gu  ccggU    GACUCCGGU     CAGGGC guc  
------gcca   a   c  a         -au   aag  cu     ACUA         GUAGA      g   g 


Annotation confidence Not enough data
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Genome context
chr17: 7152907-7153051 [+]

Database links

Mature cfa-miR-8846

Accession MIMAT0034340
Description Canis familiaris cfa-miR-8846 mature miRNA
Sequence 81 - CGGGACAGAUGUGGCCUCAGAUCAU - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545