Stem-loop cfa-mir-8799d

Accession

MI0027934

Description

Canis familiaris cfa-mir-8799d precursor miRNA

Gene family

MIPF0001881; mir-8799

Sequence

ccucccggccucugccugucccggggggaggccagauccugggcugugucccggcgcccugugcuccggagccugCGCUGUUGGAUUCGCGCUCCAGGGCcgcgcaacccccuccgcggagccgccgcccgagcc
.(((.((((((((((.......((((((..(((.(.((((((((((.((((((((((...(.(((....)))).))))))..)))).)).)).))))))).).))..))))))..))))))..))))...)))..

Structure

-c   --c    --      cuguccc      ag  - a a      -  -  u    --      ccu u   c 
  cuc   cggc  cucugc       gggggg  gc c g uccugg gc ug gucc  cggcgc   g gcu c
  |||   ||||  ||||||       ||||||  || | | |||||| || || ||||  ||||||   | |||  
  gag   gccg  gaggcg       uccccc  cg g C GGGACC CG GC UAGG  GUCGCg   c cga g
cc   ccc    cc      -----cc      aa  c c -      U  C  U    UU      --u -   g 

Annotation confidence Not enough data

Genome context

chr16: 26379772-26379906 [-]

Mature cfa-miR-8799d

• Accession: MIMAT0034341
• Description: Canis familiaris cfa-miR-8799d mature miRNA
• Sequence: 76 - CGCUGUUGGAUUCGCGCUCCAGGGC - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545