Stem-loop cfa-mir-8850

Accession

MI0027941

Description

Canis familiaris cfa-mir-8850 precursor miRNA

Sequence

ggaugagggaaccagcacuuggagguuaagagcugugugaggucagguaauuaguguacugcucagugUGCAGCUGGGUUCUGGAACCAACacuucuucaucucaguggcuuaacccagca
......(((....((((((..(((((.(((((..((((..(((((((...(((((((((........))))).))))..))))..))).))))))))).)))))))).)))...)))....

Structure

ggauga   aacc   -   ug     u     cu    ga   --    uaa    -     ugc 
      ggg    agc acu  gaggu aagag  gugu  ggu  cagg   uuag uguac   u
      |||    ||| |||  ||||| |||||  ||||  |||  ||||   |||| |||||    
      ccc    ucg uga  cucua uucuu  caCA  CCA  GUCU   GGUC ACGUg   c
--acga   -aau   g   --     c     --    -A   AG    -UG    G     uga 

Annotation confidence Not enough data

Genome context

chr16: 17313541-17313661 [+]

Mature cfa-miR-8850

• Accession: MIMAT0034345
• Description: Canis familiaris cfa-miR-8850 mature miRNA
• Sequence: 69 - UGCAGCUGGGUUCUGGAACCAAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545