miRBase entry: cfa-mir-8799f

Stem-loop cfa-mir-8799f


Accession
MI0027968
Description
Canis familiaris cfa-mir-8799f precursor miRNA
Gene family
MIPF0001881; mir-8799


Sequence

gccuguccuggggggugcgcuggaucuuggacugugcccccagcacccugugcucccgggccugUGCUGUUGGAAUCGUAGUCCCGGCcacacagcucccucugcccacagcc
..((((...((((((.((..((...((.((((((((.((.((((((((((......))))...))))))..))...)))))))).))...))..)).))))))....))))..

Structure
gc    -ccu      u  gc  gau  u        --c  -c      ---    ug 
  cugu    gggggg gc  ug   cu ggacugug   cc  cagcac   ccug  c
  ||||    |||||| ||  ||   || ||||||||   ||  ||||||   ||||   
  gaca    ucuccc cg  ac   GG CCUGAUGC   GG  GUCGUg   gggc  u
cc    cccg      u  ac  acC  C        UAA  UU      ucc    cc 


Annotation confidence Not enough data
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Genome context
chr6: 40559217-40559329 [-]

Database links

Mature cfa-miR-8799f

Accession MIMAT0034372
Description Canis familiaris cfa-miR-8799f mature miRNA
Sequence 65 - UGCUGUUGGAAUCGUAGUCCCGGC - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545