Stem-loop cfa-mir-8873a

Accession

MI0027969

Description

Canis familiaris cfa-mir-8873a precursor miRNA

Gene family

MIPF0001952; mir-8873

Sequence

cugugcugcuggaaucguguuuccggggccauggcUCCUGAAGGCAGUGGGGUGUAGCcuccacuccuggagcugccgccuaacccacuggcuucucccugaggcccugccaggugagugcuccagcccuu
.......((((((.((((.(...(((((((.(((.....((((.((((((((((((((.((((....)))))))).)))....))))))).))))...))).)))))))..).))))....))))))....

Structure

cugugcu      ---a    g uuc       a   cUCCU    G       ----   -    c    c 
       gcugga    ucgu u   cggggcc ugg     GAAG CAGUGGG    GUG UAGC ucca u
       ||||||    |||| |   ||||||| |||     |||| |||||||    ||| |||| ||||  
       cgaccu    agug a   gucccgg guc     cuuc gucaccc    cgc gucg aggu c
---uucc      cgug    g -cc       a   --ccu    g       aauc   c    -    c 

Annotation confidence Not enough data

Genome context

chr6: 13982905-13983035 [-]

Mature cfa-miR-8873a

• Accession: MIMAT0034373
• Description: Canis familiaris cfa-miR-8873a mature miRNA
• Sequence: 36 - UCCUGAAGGCAGUGGGGUGUAGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545