Stem-loop cfa-mir-7180

Accession

MI0027979

Description

Canis familiaris cfa-mir-7180 precursor miRNA

Gene family

MIPF0002036; mir-7180

Sequence

aggcugaggauugguggucucagggaguguacuuccuggggccucugggcauauaauucCUGUGGCCUCUGGGUGUGUACCCUcuguggcuuccagguucaug
....((((..((((.((((.(((((.((((((.(((.((((((.(.(((........))).).)))))).))).)))))).))))).)))).)))).))))..

Structure

aggc    ga    u    u     a      u   u      u u   cau 
    ugag  uugg gguc caggg guguac ucc ggggcc c ggg   a
    ||||  |||| |||| ||||| |||||| ||| |||||| | |||    
    acuu  gacc ucgg gucUC CAUGUG GGG CUCCGG G Ccu   u
--gu    -g    u    u     C      U   U      U U   uaa 

Annotation confidence Not enough data

Genome context

chr7: 35996308-35996410 [+]

Mature cfa-miR-7180

• Accession: MIMAT0034382
• Description: Canis familiaris cfa-miR-7180 mature miRNA
• Sequence: 60 - CUGUGGCCUCUGGGUGUGUACCCU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545